151 citations · 278 across the 6 of their papers we have counts for
4 papers · 1 filter
Reproducible image-based profiling with Pycytominer
Erik Serrano, Srinivas Niranj Chandrasekaran, Dave Bunten +25
Advances in high-throughput microscopy have enabled the rapid acquisition of large numbers of high-content microscopy images. Whether by deep learning or classical algorithms, imag…
The Multi-modality Cell Segmentation Challenge: Towards Universal Solutions
Jun Ma, Ronald Xie, Shamini Ayyadhury +37
Cell segmentation is a critical step for quantitative single-cell analysis in microscopy images. Existing cell segmentation methods are often tailored to specific modalities or req…
Pseudo-Labeling Enhanced by Privileged Information and Its Application to In Situ Sequencing Images
Marzieh Haghighi, Mario C. Cruz, Erin Weisbart +9
Various strategies for label-scarce object detection have been explored by the computer vision research community. These strategies mainly rely on assumptions that are specific to…
CellProfiler plugins -- an easy image analysis platform integration for containers and Python tools
Erin Weisbart, Callum Tromans-Coia, Barbara Diaz-Rohrer +7
CellProfiler is a widely used software for creating reproducible, reusable image analysis workflows without needing to code. In addition to the >90 modules that make up the main Ce…