2 papers
q-bio.QM2024
Substrate Prediction for RiPP Biosynthetic Enzymes via Masked Language Modeling and Transfer Learning
Joseph D. Clark, Xuenan Mi, Douglas A. Mitchell +1
Ribosomally synthesized and post-translationally modified peptide (RiPP) biosynthetic enzymes often exhibit promiscuous substrate preferences that cannot be reduced to simple rules…
q-bio.BM2023
Leveraging Machine Learning Models for Peptide-Protein Interaction Prediction
Song Yin, Xuenan Mi, Diwakar Shukla
Peptides play a pivotal role in a wide range of biological activities through participating in up to 40% protein-protein interactions in cellular processes. They also demonstrate r…