4 papers
PhysicianBench: Evaluating LLM Agents in Real-World EHR Environments
Ruoqi Liu, Imran Q. Mohiuddin, Austin J. Schoeffler +10
We introduce PhysicianBench, a benchmark for evaluating LLM agents on physician tasks grounded in real clinical setting within electronic health record (EHR) environments. Existing…
Intervention-Aware Multiscale Representation Learning from Imaging Phenomics and Perturbation Transcriptomics
Jiayuan Chen, Ruoqi Liu, Zishan Gu +1
Microscopy-based phenotypic profiling is scalable for drug discovery but lacks the mechanistic depth of transcriptomics, which remains costly and scarce. Existing multimodal approa…
ClinicalTrialsHub: Bridging Registries and Literature for Comprehensive Clinical Trial Access
Jiwoo Park, Ruoqi Liu, Avani Jagdale +5
We present ClinicalTrialsHub, an interactive search-focused platform that consolidates all data from ClinicalTrials.gov and augments it by automatically extracting and structuring…
A Deep Subgrouping Framework for Precision Drug Repurposing via Emulating Clinical Trials on Real-world Patient Data
Seungyeon Lee, Ruoqi Liu, Feixiong Cheng +1
Drug repurposing identifies new therapeutic uses for existing drugs, reducing the time and costs compared to traditional de novo drug discovery. Most existing drug repurposing stud…