4 papers
ANCHOR-RE: An Agentic Neuro-Symbolic Framework for Grounded Biomedical Relation Extraction
Shufan Ming, Yikun Han, Gibong Hong +2
Biomedical relation extraction (BioRE) extracts structured knowledge from biomedical literature for applications such as knowledge base construction and hypothesis generation. Trad…
Robust Biomedical Publication Type and Study Design Classification with Knowledge-Guided Perturbations
Shufan Ming, Joe D. Menke, Neil R. Smalheiser +1
Accurately and consistently indexing biomedical literature by publication type and study design is essential for supporting evidence synthesis and knowledge discovery. Prior work o…
Divide-Prompt-Refine: a Training-Free, Structure-Aware Framework for Biomedical Abstract Generation
Sylvey Lin, Joe Menke, Shufan Ming +3
Biomedical abstracts play a critical role in downstream NLP applications, such as information retrieval, biocuration, and biomedical knowledge discovery. However, a non-trivial num…
Multi-label Sequential Sentence Classification via Large Language Model
Mengfei Lan, Lecheng Zheng, Shufan Ming +1
Sequential sentence classification (SSC) in scientific publications is crucial for supporting downstream tasks such as fine-grained information retrieval and extractive summarizati…