2 citations · 2 across the 1 of their papers we have counts for
3 papers
q-bio.QM2026★ 2 cited
Pretraining a Foundation Model for Small-Molecule Natural Products
Yuheng Ding, Bo Qiang, Shaoning Li +8
Natural products, as metabolites from microorganisms, animals, or plants, exhibit diverse biological activities, making them crucial for drug discovery. Nowadays, existing deep lea…
cs.CE2025
Learning the PTM Code through a Coarse-to-Fine, Mechanism-Aware Framework
Jingjie Zhang, Hanqun Cao, Zijun Gao +8
Post-translational modifications (PTMs) form a combinatorial "code" that regulates protein function, yet deciphering this code - linking modified sites to their catalytic enzymes -…
cs.LG2025
ProteinAE: Protein Diffusion Autoencoders for Structure Encoding
Shaoning Li, Le Zhuo, Yusong Wang +5
Developing effective representations of protein structures is essential for advancing protein science, particularly for protein generative modeling. Current approaches often grappl…