150 citations · 225 across the 7 of their papers we have counts for
7 papers
Simple sign epistasis and evolutionary detours in fitness landscapes
Paolo Ribeca, Alejandro Castro, Alejandro Lage-Castellanos +8
In epistatic fitness landscapes, the fitness effect of a mutation depends on the genetic background and may even switch between deleterious and beneficial depending on the presence…
Networks of Ethereum Non-Fungible Tokens: A graph-based analysis of the ERC-721 ecosystem
S. Casale-Brunet, P. Ribeca, P. Doyle +1
Non-fungible tokens (NFTs) as a decentralized proof of ownership represent one of the main reasons why Ethereum is a disruptive technology. This paper presents the first systematic…
CARGO: Effective format-free compressed storage of genomic information
Łukasz Roguski, Paolo Ribeca
The recent super-exponential growth in the amount of sequencing data generated worldwide has put techniques for compressed storage into the focus. Most available solutions, however…
Faster exact Markovian probability functions for motif occurrences: a DFA-only approach
Paolo Ribeca, Emanuele Raineri
Background: The computation of the statistical properties of motif occurrences has an obviously relevant practical application: for example, patterns that are significantly over- o…
From Useful Algorithms for Slowly Convergent Series to Physical Predictions Based on Divergent Perturbative Expansions
E. Caliceti, M. Meyer-Hermann, P. Ribeca +2
This review is focused on the borderline region of theoretical physics and mathematics. First, we describe numerical methods for the acceleration of the convergence of series. Thes…
Towards a fully automated computation of RG-functions for the 3- O(N) vector model: Parametrizing amplitudes
Riccardo Guida, Paolo Ribeca
Within the framework of field-theoretical description of second-order phase transitions via the 3-dimensional O(N) vector model, accurate predictions for critical exponents can be…
The Topology of Pseudoknotted Homopolymers
G. Vernizzi, P. Ribeca, H. Orland +1
We consider the folding of a self-avoiding homopolymer on a lattice, with saturating hydrogen bond interactions. Our goal is to numerically evaluate the statistical distribution of…