4 citations · 8 across the 2 of their papers we have counts for
3 papers
BIOTRAM: Biochemistry-informed Transformer for Relative Abundance via Metabarcoding
Emma Boehly, Scott C. Lowe, Ken A. Thompson +70
Arthropod monitoring at scale begins with metabarcoding of bulk samples: trap collections of hundreds to thousands of specimens processed as one unit, extraction of DNA from the bu…
BIOSCAN-5M: A Multimodal Dataset for Insect Biodiversity
Zahra Gharaee, Scott C. Lowe, ZeMing Gong +10
As part of an ongoing worldwide effort to comprehend and monitor insect biodiversity, this paper presents the BIOSCAN-5M Insect dataset to the machine learning community and establ…
BarcodeBERT: Transformers for Biodiversity Analysis
Pablo Millan Arias, Niousha Sadjadi, Monireh Safari +9
In the global challenge of understanding and characterizing biodiversity, short species-specific genomic sequences known as DNA barcodes play a critical role, enabling fine-grained…