92 citations · 685 across the 84 of their papers we have counts for
7 papers · 2 filters
DeepDriveMD: Deep-Learning Driven Adaptive Molecular Simulations for Protein Folding
Hyungro Lee, Heng Ma, Matteo Turilli +3
Simulations of biological macromolecules play an important role in understanding the physical basis of a number of complex processes such as protein folding. Even with increasing c…
Performance Characterization and Modeling of Serverless and HPC Streaming Applications
Andre Luckow, Shantenu Jha
Experiment-in-the-Loop Computing (EILC) requires support for numerous types of processing and the management of heterogeneous infrastructure over a dynamic range of scales: from th…
Characterizing the Performance of Executing Many-tasks on Summit
Matteo Turilli, Andre Merzky, Thomas Naughton +2
Many scientific workloads are comprised of many tasks, where each task is an independent simulation or analysis of data. The execution of millions of tasks on heterogeneous HPC pla…
Parallel Performance of Molecular Dynamics Trajectory Analysis
Mahzad Khoshlessan, Ioannis Paraskevakos, Geoffrey C. Fox +2
The performance of biomolecular molecular dynamics simulations has steadily increased on modern high performance computing resources but acceleration of the analysis of the output…
Workflow Design Analysis for High Resolution Satellite Image Analysis
Ioannis Paraskevakos, Matteo Turilli, Bento Collares Gonçalves +2
Ecological sciences are using imagery from a variety of sources to monitor and survey populations and ecosystems. Very High Resolution (VHR) satellite imagery provide an effective…
Middleware Building Blocks for Workflow Systems
Matteo Turilli, Vivek Balasubramanian, Andre Merzky +2
This paper describes a building blocks approach to the design of scientific workflow systems. We discuss RADICAL-Cybertools as one implementation of the building blocks concept, sh…