11 citations · 11 across the 2 of their papers we have counts for
2 papers
q-bio.GN2025
Genome-Factory: A Library for Tuning, Deploying, and Interpreting Genomic Foundation Models
Weimin Wu, Xuefeng Song, Yibo Wen +5
We introduce Genome-Factory, the first integrated Python library for tuning, deploying, and interpreting genomic foundation models. Our core contribution is to simplify and unify t…
q-bio.GN2024★ 11 cited
DNABERT-S: Pioneering Species Differentiation with Species-Aware DNA Embeddings
Zhihan Zhou, Weimin Wu, Harrison Ho +5
We introduce DNABERT-S, a tailored genome model that develops species-aware embeddings to naturally cluster and segregate DNA sequences of different species in the embedding space.…