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cond-mat.soft2006★ 57 cited
Bubble Statistics and Dynamics in Double-Stranded DNA
B. S. Alexandrov, L. T. Wille, K. O. Rasmussen +2
The dynamical properties of double-stranded DNA are studied in the framework of the Peyrard-Bishop-Dauxois model using Langevin dynamics. Our simulations are analyzed in terms of t…
cond-mat.soft2006
Healing Length and Bubble Formation in DNA
Z. Rapti, A. Smerzi, K. O. Rasmussen +3
We have recently suggested that the probability for the formation of thermally activated DNA bubbles is, to a very good approximation, proportional to the number of soft AT pairs o…