3 papers
q-bio.MN2022
From time-series transcriptomics to gene regulatory networks: a review on inference methods
Malvina Marku, Vera Pancaldi
Inference of gene regulatory networks has been an active area of research for around 20 years, leading to the development of sophisticated inference algorithms based on a variety o…
q-bio.MN2015
Integrating epigenomic data and 3D genomic structure with a new measure of chromatin assortativity
Vera Pancaldi, Enrique Carrillo-de-Santa-Pau, Biola Maria Javierre +5
Network analysis is a powerful way of modeling chromatin interactions. Assortativity is a network property used in social sciences to identify factors affecting how people establis…
cond-mat.stat-mech2006
Permeability up-scaling using Haar wavelets
V. Pancaldi, K. Christensen, P. R. King
In the context of flow in porous media, up-scaling is the coarsening of a geological model and it is at the core of water resources research and reservoir simulation. An ideal up-s…