22 citations · 52 across the 6 of their papers we have counts for
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q-bio.QM2013★ 5 cited
Flexible RNA design under structure and sequence constraints using formal languages
Yu Zhou, Yann Ponty, Stéphane Vialette +3
The problem of RNA secondary structure design (also called inverse folding) is the following: given a target secondary structure, one aims to create a sequence that folds into, or…
q-bio.QM2012
Tree decomposition and parameterized algorithms for RNA structure-sequence alignment including tertiary interactions and pseudoknots
Philippe Rinaudo, Yann Ponty, Dominique Barth +1
We present a general setting for structure-sequence comparison in a large class of RNA structures that unifies and generalizes a number of recent works on specific families on stru…