activity
20042011
most citedDoes the dynamics of sine-Gordon solitons predict active regions of DNA?

25 citations · 27 across the 2 of their papers we have counts for

collaborators

6 papers

physics.soc-ph20112 cited

Simple rules govern finite-size effects in scale-free networks

Sara Cuenda, Juan A. Crespo

We give an intuitive though general explanation of the finite-size effect in scale-free networks in terms of the degree distribution of the starting network. This result clarifies…

q-bio.GN200625 cited

Does the dynamics of sine-Gordon solitons predict active regions of DNA?

Sara Cuenda, Angel Sanchez, Niurka R. Quintero

In this work we analyze the possibility that soliton dynamics in a simple nonlinear model allows functionally relevant predictions of the behaviour of DNA. This suggestion was firs…

q-bio.OT2005

On the discrete Peyrard-Bishop model of DNA: stationary solutions and stability

Sara Cuenda, Angel Sanchez

As a first step in the search of an analytical study of mechanical denaturation of DNA in terms of the sequence, we study stable, stationary solutions in the discrete, finite and h…

nlin.PS2004

Length scale competition in soliton bearing equations: A collective coordinate approach

Sara Cuenda, Angel Sanchez

We study the phenomenon of length scale competition, an instability of solitons and other coherent structures that takes place when their size is of the same order of some characte…

q-bio.GN2004

Nonlinear excitations in DNA: Aperiodic models vs actual genome sequences

Sara Cuenda, Angel Sanchez

We study the effects of the sequence on the propagation of nonlinear excitations in simple models of DNA in which we incorporate actual DNA sequences obtained from human genome dat…

q-bio.BM2004

Disorder and fluctuations in nonlinear excitations in DNA

Sara Cuenda, Angel Sanchez

We study the effects of the sequence on the propagation of nonlinear excitations in simple models of DNA, and how those effects are modified by noise. Starting from previous result…