23 citations · 24 across the 3 of their papers we have counts for
3 papers
physics.bio-ph2011
Biomolecular transitions: efficient computation of pathways, free energies, and rates
Divesh Bhatt, Ivet Bahar
We present an efficient method to compute transition rates between states for a two-state system. The method utilizes the equivalence between steady-state flux and mean first passa…
physics.bio-ph2011★ 1 cited
Stochastic modeling of p53-regulated apoptosis upon radiation damage
Divesh Bhatt, Zoltan Oltvai, Ivet Bahar
We develop and study the evolution of a model of radiation induced apoptosis in cells using stochastic simulations, and identified key protein targets for effective mitigation of r…
q-bio.MN2006★ 23 cited
Topological basis of signal integration in the transcriptional-regulatory network of the yeast, Saccharomyces cerevisiae
Illes J. Farkas, Chuang Wu, Chakra Chennubhotla +2
BACKGROUND. Signal recognition and information processing is a fundamental cellular function, which in part involves comprehensive transcriptional regulatory (TR) mechanisms carrie…