4 citations · 9 across the 11 of their papers we have counts for
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math.AG2014★ 1 cited
H-Representation of the Kimura-3 Polytope
Marie Mauhar, Joseph Rusinko, Zoe Vernon
Given a group-based Markov model on a tree, one can compute the vertex representation of a polytope which describes the associated toric variety. The half-space representation, how…
math.CO2014★ 2 cited
Combinatorics of k-Interval Cospeciation for Cophylogeny
Jane Ivy Coons, Joseph Rusinko
We show that the cophylogenetic distance, k-interval cospeciation, is distinct from other metrics and accounts for global congruence between locally incongruent trees. The growth o…
q-bio.QM2014
Combinatorics of Linked Systems of Quartet Trees
Emili Moan, Joseph Rusinko
We apply classical quartet techniques to the problem of phylogenetic decisiveness and find a value such that all collections of at least quartets are decisive. Moreover, we…