activity
19942026
most citedFrom principal component to direct coupling analysis of coevolution in proteins: Low-eigenvalue modes are needed for structure prediction

145 citations · 404 across the 7 of their papers we have counts for

collaborators

7 papers

cs.LG2026

Spherical Boltzmann machines: a solvable theory of learning and generation in energy-based models

Thomas Tulinski, Simona Cocco, Rémi Monasson +1

Energy-based models (EBMs) are flexible generative architectures inspired by statistical physics, but their learning and generative properties remain poorly understood. Here, we an…

cond-mat.dis-nn2026

Replica Theory of Spherical Boltzmann Machine Ensembles

Thomas Tulinski, Jorge Fernandez-De-Cossio-Diaz, Simona Cocco +1

Training in machine learning generally consists in finding one model, whose parameters minimize a data-dependent loss. Yet, empirical work shows that ensemble learning, an approach…

cond-mat.stat-mech2013★ 35 cited

Cross-talk and transitions between multiple spatial maps in an attractor neural network model of the hippocampus: phase diagram (I)

Rémi Monasson, Sophie Rosay

We study the stable phases of an attractor neural network model, with binary units, for hippocampal place cells encoding 1D or 2D spatial maps or environments. Using statistical me…

q-bio.BM2012★ 145 cited

From principal component to direct coupling analysis of coevolution in proteins: Low-eigenvalue modes are needed for structure prediction

Simona Cocco, Remi Monasson, Martin Weigt

Various approaches have explored the covariation of residues in multiple-sequence alignments of homologous proteins to extract functional and structural information. Among those ar…

cond-mat.stat-mech2007★ 15 cited

Reconstructing a Random Potential from its Random Walks

Simona Cocco, Remi Monasson

The problem of how many trajectories of a random walker in a potential are needed to reconstruct the values of this potential is studied. We show that this problem can be solved by…

cond-mat.dis-nn1999★ 139 cited

A variational description of the ground state structure in random satisfiability problems

Giulio Biroli, Remi Monasson, Martin Weigt

A variational approach to finite connectivity spin-glass-like models is developed and applied to describe the structure of optimal solutions in random satisfiability problems. Our…