activity
20072023
most citedFast and accurate multivariate Gaussian modeling of protein families: Predicting residue contacts and protein-interaction partners

158 citations · 1.4k across the 32 of their papers we have counts for

collaborators
Showing 2016Show all

5 papers · 1 filter

cs.LG2016★ 104 cited

Entropy-SGD: Biasing Gradient Descent Into Wide Valleys

Pratik Chaudhari, Anna Choromanska, Stefano Soatto +6

This paper proposes a new optimization algorithm called Entropy-SGD for training deep neural networks that is motivated by the local geometry of the energy landscape. Local extrema…

cond-mat.stat-mech2016★ 4 cited

A method to reduce the rejection rate in Monte Carlo Markov Chains

Carlo Baldassi

We present a method for Monte Carlo sampling on systems with discrete variables (focusing in the Ising case), introducing a prior on the candidate moves in a Metropolis-Hastings sc…

q-bio.QM2016★ 148 cited

Simultaneous identification of specifically interacting paralogs and inter-protein contacts by Direct-Coupling Analysis

Thomas Gueudré, Carlo Baldassi, Marco Zamparo +2

Understanding protein-protein interactions is central to our understanding of almost all complex biological processes. Computational tools exploiting rapidly growing genomic databa…

stat.ML2016★ 149 cited

Unreasonable Effectiveness of Learning Neural Networks: From Accessible States and Robust Ensembles to Basic Algorithmic Schemes

Carlo Baldassi, Christian Borgs, Jennifer Chayes +4

In artificial neural networks, learning from data is a computationally demanding task in which a large number of connection weights are iteratively tuned through stochastic-gradien…

cond-mat.dis-nn2016★ 24 cited

Learning may need only a few bits of synaptic precision

Carlo Baldassi, Federica Gerace, Carlo Lucibello +2

Learning in neural networks poses peculiar challenges when using discretized rather then continuous synaptic states. The choice of discrete synapses is motivated by biological reas…