activity
20022023
most citedAccelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molecular Dynamics

429 citations · 996 across the 12 of their papers we have counts for

collaborators

12 papers

quant-ph2023

Nonadiabatic nuclear-electron dynamics: a quantum computing approach

Arseny Kovyrshin, Mårten Skogh, Lars Tornberg +6

The combined quantum electron-nuclear dynamics is often associated with the Born-Huang expansion of the molecular wave function and the appearance of nonadiabatic effects as a pert…

quant-ph2023★ 12 cited

A Quantum Computing Implementation of Nuclear-Electronic Orbital (NEO) Theory: Towards an Exact pre-Born-Oppenheimer Formulation of Molecular Quantum Systems

Arseny Kovyrshin, Mårten Skogh, Anders Broo +4

Nuclear quantum phenomena beyond the Born-Oppenheimer approximation are known to play an important role in a growing number of chemical and biological processes. While there exists…

q-bio.QM2022

Accelerating Inhibitor Discovery With A Deep Generative Foundation Model: Validation for SARS-CoV-2 Drug Targets

Vijil Chenthamarakshan, Samuel C. Hoffman, C. David Owen +17

The discovery of novel inhibitor molecules for emerging drug-target proteins is widely acknowledged as a challenging inverse design problem: Exhaustive exploration of the vast chem…

quant-ph2021★ 11 cited

Coarse grained intermolecular interactions on quantum processors

Lewis W. Anderson, Martin Kiffner, Panagiotis Kl. Barkoutsos +3

Variational quantum algorithms (VQAs) are increasingly being applied in simulations of strongly-bound (covalently bonded) systems using full molecular orbital basis representations…

cond-mat.soft2021★ 52 cited

Network Topology in Water Nanoconfined between Phospholipid Membranes

Fausto Martelli, Jason Crain, Giancarlo Franzese

Water provides the driving force for the assembly and stability of many cellular components. Despite its impact on biological functions, a nanoscale understanding of the relationsh…

cs.LG2020★ 429 cited

Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molecular Dynamics

Payel Das, Tom Sercu, Kahini Wadhawan +12

De novo therapeutic design is challenged by a vast chemical repertoire and multiple constraints, e.g., high broad-spectrum potency and low toxicity. We propose CLaSS (Controlled La…