3 papers
q-bio.MN2026
Boolean models coarsely sample continuous dynamics of regulatory networks
Breschine Cummins, Marcio Gameiro, Tomáš Gedeon +2
Boolean models are widely used to characterize the dynamics of gene regulatory networks. However, their coarse state discretization limits their ability to capture complex continuo…
q-bio.PE2024
Generalized Measures of Population Synchrony
Francis C. Motta, Kevin McGoff, Breschine Cummins +1
Synchronized behavior among individuals is a ubiquitous feature of populations. Understanding mechanisms of (de)synchronization demands meaningful, interpretable, computable quanti…
math.DS2023
A yeast cell cycle pulse generator model shows consistency with multiple oscillatory and checkpoint mutant datasets
Julian Fox, Breschine Cummins, Robert C. Moseley +2
The regulatory mechanisms driving progression of the yeast cell cycle appears to be comprised of an interacting network of transcription factors (TFs), cyclin-dependent kinases (CD…