2 papers
cs.AI2026
ProtLingo: Efficient Protein Language Modeling via Conditional Memory and Expert Routing
Mingrui Li, Sixian Shen, Minzhang Li +4
Proteins perform diverse cellular functions, and even single amino-acid substitutions can alter stability, activity, or molecular interactions. Protein language models (PLMs) provi…
cs.LG2026
Evolution-Aware MSA Reasoning for Subsampling via Factor Graphs
Zhangzhi Xiong, Minzhang Li, Haotian Yu +6
Multiple Sequence Alignments (MSAs) provide protein language models with explicit evolutionary context, but their large depth makes subsampling unavoidable under limited token budg…