38 citations · 83 across the 4 of their papers we have counts for
4 papers
Estimation of the methylation pattern distribution from deep sequencing data
Peijie Lin, Sylvain Foret, Susan R. Wilson +1
Motivation: Bisulphite sequencing enables the detection of cytosine methylation. The sequence of the methylation states of cytosines on any given read forms a methylation pattern t…
Empirical distribution of k-word matches in biological sequences
Sylvain Foret, Susan R. Wilson, Conrad J. Burden
This study focuses on an alignment-free sequence comparison method: the number of words of length k shared between two sequences, also known as the D_2 statistic. The advantages of…
Approximate word matches between two random sequences
Conrad J. Burden, Miriam R. Kantorovitz, Susan R. Wilson
Given two sequences over a finite alphabet , the statistic is the number of -letter word matches between the two sequences. This statistic is used in bioinfor…
Adsorption models of hybridization and post-hybridisation behaviour on oligonucleotide microarrays
C. J. Burden, Y. Pittelkow, S. R. Wilson
Analysis of data from an Affymetrix Latin Square spike-in experiment indicates that measured fluorescence intensities of features on an oligonucleotide microarray are related to sp…