activity
20042021
most citedMolecular dynamics simulation of multivalent ion mediated DNA attraction

115 citations · 434 across the 8 of their papers we have counts for

collaborators

8 papers

physics.bio-ph2021

Mobility of bacterial protein Hfq on dsDNA; Role of C-terminus mediated transient binding

Chuan Jie Tan, Rajib Basak, Indresh Yadav +3

The mobility of protein is fundamental in the machinery of life. Here, we have investigated the effect of DNA binding in conjunction with DNA internal motion of the bacterial Hfq m…

cond-mat.soft2020★ 29 cited

Interaction between DNA and the Hfq amyloid-like region triggers a viscoelastic response

Omar El Hamoui, Indresh Yadav, Milad Radiom +4

Molecular transport of biomolecules plays a pivotal role in the machinery of life. Yet, this role is poorly understood due the lack of quantitative information. Here, the role and…

physics.bio-ph2017★ 67 cited

Compaction and condensation of DNA mediated by the C-terminal domain of Hfq

Antoine Malabirade, Kai Jiang, Krzysztof Kubiak +6

Hfq is a bacterial protein that is involved in several aspects of nucleic acids metabolism. It has been described as one of the nucleoid associated proteins shaping the bacterial c…

physics.bio-ph2015★ 28 cited

Revisiting the anomalous bending elasticity of sharply bent DNA

Peiwen Cong, Liang Dai, Hu Chen +3

Several recent experiments suggest that sharply bent DNA has a surprisingly high bending flexibility, but the cause of this flexibility is poorly understood. Although excitation of…

physics.bio-ph2013★ 65 cited

Bipedal nanowalker by pure physical mechanisms

Juan Cheng, Sarangapani Sreelatha, Ruizheng Hou +4

Artificial nanowalkers are inspired by biomolecular counterparts from living cells, but remain far from comparable to the latter in design principles. The walkers reported to date…

physics.bio-ph2008★ 100 cited

Effects of electrostatic screening on the conformation of single DNA molecules confined in a nanochannel

Ce Zhang, Fang Zhang, Jeroen A. van Kan +1

Single T4-DNA molecules were confined in rectangular-shaped channels with a depth of 300 nm and a width in the range 150-300 nm casted in a poly(dimethylsiloxane) nanofluidic chip.…