9 papers
Large-Scale Deployment and Analytical Implications of Structured Quality Control in Diffusion Magnetic Resonance Imaging
Michael E. Kim, Chenyu Gao, Karthik Ramadass +17
Purpose: Diffusion MRI (dMRI) provides a diverse set of quantitative measures and derived datatypes to assess white matter microstructure and macrostructure. Coupled with the incre…
ECLARE: Efficient cross-planar learning for anisotropic resolution enhancement
Samuel W. Remedios, Shuwen Wei, Shuo Han +6
In clinical imaging, magnetic resonance (MR) image volumes are often acquired as stacks of 2D slices with decreased scan times, improved signal-to-noise ratio, and image contrasts…
Personalized White Matter Bundle Segmentation for Early Childhood
Elyssa M. McMaster, Michael E. Kim, Nancy R. Newlin +12
White matter segmentation methods from diffusion magnetic resonance imaging range from streamline clustering-based approaches to bundle mask delineation, but none have proposed a p…
Fully Differentiable dMRI Streamline Propagation in PyTorch
Jongyeon Yoon, Elyssa M. McMaster, Michael E. Kim +4
Diffusion MRI (dMRI) provides a distinctive means to probe the microstructural architecture of living tissue, facilitating applications such as brain connectivity analysis, modelin…
Robust Containerization of the High Angular Resolution Functional Imaging (HARFI) Pipeline
Zhiyuan Li, Kurt G. Schilling, Bennett A. Landman
Historically, functional magnetic resonance imaging (fMRI) of the brain has focused primarily on gray matter, particularly the cortical gray matter and associated nuclei. However,…
Multi-Modality Conditioned Variational U-Net for Field-of-View Extension in Brain Diffusion MRI
Zhiyuan Li, Chenyu Gao, Praitayini Kanakaraj +13
An incomplete field-of-view (FOV) in diffusion magnetic resonance imaging (dMRI) can severely hinder the volumetric and bundle analyses of whole-brain white matter connectivity. Al…