3 papers
q-bio.QM2026
Exact phylodynamic likelihood via structured Markov genealogy processes
Aaron A. King, Qianying Lin, Edward L. Ionides
We show that each member of a broad class of Markovian population models induces a unique stochastic process on the space of genealogies. We construct this genealogy process and de…
stat.AP2025
Mechanistic models for panel data: Analysis of ecological experiments with four interacting species
Bo Yang, Jesse Wheeler, Meghan A. Duffy +2
In an ecological context, panel data arise when time series measurements are made on a collection of ecological processes. Each process may correspond to a spatial location for fie…
stat.ME2025
panelPomp: Analysis of Panel Data via Partially Observed Markov Processes in R
Carles Bretó, Jesse Wheeler, Aaron A. King +1
Panel data arise when time series measurements are collected from multiple, dynamically independent but structurally related systems. Each system's time series can be modeled as a…