3 papers
q-bio.OT2024
Omnibenchmark: transparent, reproducible, extensible and standardized orchestration of solo and collaborative benchmarks
Izaskun Mallona, Almut Luetge, Ben Carrillo +6
Benchmarking involves designing, running and disseminating rigorous performance assessments of methods, most often for data analysis and software tools, but the process can also be…
q-bio.OT2024
Building a continuous benchmarking ecosystem in bioinformatics
Izaskun Mallona, Charlotte Soneson, Ben Carrillo +5
Benchmarking, which involves collecting reference datasets and demonstrating method performances, is a requirement for the development of new computational tools, but also becomes…
q-bio.OT2024
Ten simple rules for collaborating with wet lab researchers for computational researchers
Mark D. Robinson, Peiying Cai, Martin Emons +10
Computational biologists are frequently engaged in collaborative data analysis with wet lab researchers. These interdisciplinary projects, as necessary as they are to the scientifi…