11 citations · 15 across the 3 of their papers we have counts for
3 papers
q-bio.GN2024
Rawsamble: Overlapping and Assembling Raw Nanopore Signals using a Hash-based Seeding Mechanism
Can Firtina, Maximilian Mordig, Harun Mustafa +7
Raw nanopore signal analysis is a common approach in genomics to provide fast and resource-efficient analysis without translating the signals to bases (i.e., without basecalling).…
q-bio.GN2014★ 11 cited
DNA methylation variation in Arabidopsis has a genetic basis and shows evidence of local adaptation
Manu J. Dubin, Pei Zhang, Dazhe Meng +15
Epigenome modulation in response to the environment potentially provides a mechanism for organisms to adapt, both within and between generations. However, neither the extent to whi…
q-bio.GN2013★ 4 cited
mTim: Rapid and accurate transcript reconstruction from RNA-Seq data
Georg Zeller, Nico Goernitz, Andre Kahles +4
Recent advances in high-throughput cDNA sequencing (RNA-Seq) technology have revolutionized transcriptome studies. A major motivation for RNA-Seq is to map the structure of express…