2 papers
cs.LG2026
Poisoning the corpora of protein design systems during pre-training and retrieval
Charalampos Koilakos, Kimon-Antonios Provatas, Michail Patsakis +3
Protein foundation models increasingly support the generation of novel biological sequences, yet their reliance on large public datasets creates opportunities for adversarial manip…
q-bio.QM2024
MAFin: Motif Detection in Multiple Alignment Files
Michail Patsakis, Kimonas Provatas, Fotis A. Baltoumas +4
Motivation: Genome and Proteome Alignments, represented by the Multiple Alignment File (MAF) format, have become a standard approach in the field of comparative genomics and proteo…