175 citations · 333 across the 5 of their papers we have counts for
Showing 2013Show all
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q-bio.BM2013★ 26 cited
Entropic stabilization of the folded states of RNA due to macromolecular crowding
Natalia A. Denesyuk, D. Thirumalai
We review the effects of macromolecular crowding on the folding of RNA by considering the simplest scenario when excluded volume interactions between crowding particles and RNA dom…
q-bio.BM2013★ 175 cited
A Coarse-Grained Model for Predicting RNA Folding Thermodynamics
Natalia A. Denesyuk, D. Thirumalai
We present a thermodynamically robust coarse-grained model to simulate folding of RNA in monovalent salt solutions. The model includes stacking, hydrogen bond and electrostatic int…