most citedPRED-CLASS: cascading neural networks for generalized protein classification and genome-wide applications

32 citations · 68 across the 6 of their papers we have counts for

collaborators

6 papers

q-bio.BM2014★ 15 cited

The Human Plasma Membrane Peripherome: Visualization and Analysis of Interactions

Katerina C. Nastou, Georgios N. Tsaousis, Kimon E. Kremizas +2

A major part of membrane function is conducted by proteins, both integral and peripheral. Peripheral membrane proteins temporarily adhere to biological membranes, either to the lip…

q-bio.QM2009★ 32 cited

PRED-CLASS: cascading neural networks for generalized protein classification and genome-wide applications

Claude Pasquier, Vasilis Promponas, Stavros Hamodrakas

A cascading system of hierarchical, artificial neural networks (named PRED-CLASS) is presented for the generalized classification of proteins into four distinct classes-transmembra…

q-bio.QM2009

A web server to locate periodicities in a sequence

Claude Pasquier, Stavros Hamodrakas, Vassilis Promponas +1

Summary : FT is a tool written in C++, which implements the Fourier analysis method to locate periodicities in aminoacid or DNA sequences. It is provided for free public use on a W…

q-bio.QM2009★ 20 cited

CoPreTHi: a Web tool which combines transmembrane protein segment prediction methods

Vasilis Promponas, Giorgos Palaios, Claude Pasquier +2

CoPreTHi is a Java based web application, which combines the results of methods that predict the location of transmembrane segments in protein sequences into a joint prediction his…

q-bio.QM2009★ 1 cited

An hierarchical artificial neural network system for the classification of transmembrane proteins

Claude Pasquier, Stavros Hamodrakas

This work presents a simple artificial neural network which classifies proteins into two classes from their sequences alone: the membrane protein class and the non-membrane protein…

q-bio.QM2009

A novel method for predicting transmembrane segments in proteins based on a statistical analysis of the SwissProt database: the PRED-TMR algorithm

Claude Pasquier, Vasilis Promponas, Giorgos Palaios +2

We present a novel method that predicts transmembrane domains in proteins using solely information contained in the sequence itself. The PRED-TMR algorithm described, refines a sta…