2 papers
q-bio.GN2026
BEND 2.0: Benchmarking the Capabilities Needed to Design DNA
Andreas Bjerregaard, Rachael DeVries, Dionysia Danai Brilli +6
Genomic foundation models are increasingly used to propose DNA sequences and edits. But successful design requires capabilities that current benchmarks do not measure. Here we intr…
cs.LG2025
Riemannian Generative Decoder
Andreas Bjerregaard, Søren Hauberg, Anders Krogh
Euclidean representations distort data with intrinsic non-Euclidean structure. While Riemannian representation learning offers a solution by embedding data onto matching manifolds,…