3 papers
cs.LG2026
TabBench-Bio: A Living Benchmark for Machine Learning on High-Dimensional Biomedical Tables
Jules Kreuer, Sofiane Ouaari, Julia Hellmig +2
Biomedical tables often combine thousands of measured variables with only tens or hundreds of labelled samples, a regime that is poorly represented in general-purpose tabular bench…
cs.CV2026
Assessing VLM Reliability for Medical Image Quality Evaluation Under Corruption and Bias
Sofiane Ouaari, Kevin Vorwalder, Nico Pfeifer
Vision-Language Models (VLMs) are increasingly applied in medical tasks such as pathology description, report generation, and visual question answering. Medical Image Quality Asses…
q-bio.GN2026
How Private Are DNA Embeddings? Inverting Foundation Model Representations of Genomic Sequences
Sofiane Ouaari, Jules Kreuer, Nico Pfeifer
DNA foundation models have become transformative tools in bioinformatics and healthcare applications. Trained on vast genomic datasets, these models can be used to generate sequenc…