3 papers
cs.LG2026
Multimodal Survival Analysis with Locally Deployable Large Language Models
Moritz Gögl, Christopher Yau
We study multimodal survival analysis integrating clinical text, tabular covariates, and genomic profiles using locally deployable large language models (LLMs). As many institution…
stat.AP2026
VAE-MS: An Asymmetric Variational Autoencoder for Mutational Signature Extraction
Ida Egendal, Rasmus Froberg Brøndum, Dan J Woodcock +2
Mutational signature analysis has emerged as a powerful method for uncovering the underlying biological processes driving cancer development. However, the signature extraction proc…
q-bio.GN2024
Wave-LSTM: Multi-scale analysis of somatic whole genome copy number profiles
Charles Gadd, Christopher Yau
Changes in the number of copies of certain parts of the genome, known as copy number alterations (CNAs), due to somatic mutation processes are a hallmark of many cancers. This geno…