3 papers
q-bio.QM2026
Biology-in-the-loop: Amortized Adaptive Hit Discovery in CRISPR Screens
Carl Edwards, Edward De Brouwer, Xiner Li +5
Many biological discovery problems require experiments to be selected sequentially under constrained budgets. CRISPR screening is a prominent example, as exhaustive perturbation te…
cs.LG2026
AssayBench: An Assay-Level Virtual Cell Benchmark for LLMs and Agents
Edward De Brouwer, Carl Edwards, Alexander Wu +9
Recent advances in machine learning and large-scale biological data collections have revived the prospect of building a virtual cell, a computational model of cellular behavior tha…
cs.CL2026
Who Guards the Benchmarks? Automated Auditing of LLM Agent Benchmarks
Xinming Tu, Tianze Wang, Yingzhou +4
As benchmarks grow in complexity, many apparent agent failures are not failures of the agent at all---they are failures of the benchmark itself: broken specifications, implicit ass…