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cs.AI2026
SoftGene: Protein Language Model-Enhanced Soft Prompting for Interpretable Gene Set Annotation
Drew Ross, Arya Hadizadeh Moghaddam, Dongjie Wang +2
Gene set analysis is a cornerstone of functional genomics, yet it remains labor-intensive and heavily dependent on manual curation and expert biological interpretation. While Large…
cs.AI2026
RASPER: Reward-Aligned Summarization of Clinical Notes for EHR Outcome Prediction
Arya Hadizadeh Moghaddam, Mohsen Nayebi Kerdabadi, Chen Chen +2
Unstructured discharge notes in Electronic Health Records (EHRs) often carry signal complementary to structured medical codes, holding patient-specific evidence that standardized c…