1 citations · 1 across the 5 of their papers we have counts for
5 papers
The Geometry of Activity Cliffs: Representation Dependence and Multi-Scale Characterization of Activity Landscapes
Pawel Dabrowski-Tumanski, Bartosz Topolski, Dariusz Plewczynski +1
Activity cliffs, structurally similar compounds with large potency differences, are widely treated as intrinsic features of chemical datasets. We argue that apart from target biolo…
OmicsLM: A Multimodal Large Language Model for Multi-Sample Omics Reasoning
Maciej Sypetkowski, Joanna Krawczyk, Łukasz Smoli{ń}ski +8
Large language models can reason over biological knowledge, but they are not naturally equipped to work with quantitative omics measurements. Existing approaches either convert exp…
BioResearcher: Scenario-Guided Multi-Agent for Translational Medicine
Remigiusz Kinas, Joanna Krawczyk, Rafał Powalski +6
Translational medicine turns underspecified development goals into evidence synthesis that must combine literature, trials, patents, and quantitative multi-omics analysis while pre…
An explainable hypothesis-driven approach to Drug-Induced Liver Injury with HADES
Maciej Wisniewski, Bartosz Topolski, Pawel Dabrowski-Tumanski +2
Drug-induced liver injury (DILI) remains a leading cause of late-stage clinical trial attrition. However, existing computational predictors primarily rely on binary classification,…
Bolek: A Multimodal Language Model for Molecular Reasoning
Frederic Grabowski, Jacek Szczerbiński, Maciej Jaśkowski +4
Molecular property models increasingly support high-stakes drug-discovery decisions, but their outputs are often difficult to audit: classical predictors return scores without rati…