130 citations · 660 across the 24 of their papers we have counts for
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physics.comp-ph2015★ 2 cited
Accelerating the convergence of replica exchange simulations using Gibbs sampling and adaptive temperature sets
Thomas Vogel, Danny Perez
We recently introduced a novel replica-exchange scheme in which an individual replica can sample from states encountered by other replicas at any previous time by way of a global c…
cond-mat.stat-mech2015★ 10 cited
Towards an optimal flow: Density-of-states-informed replica-exchange simulations
Thomas Vogel, Danny Perez
Replica exchange (RE) is one of the most popular enhanced-sampling simulations technique in use today. Despite widespread successes, RE simulations can sometimes fail to converge i…
cond-mat.soft2015★ 8 cited
Thermodynamics of the Adsorption of Flexible Polymers on Nanowires
Thomas Vogel, Jonathan Gross, Michael Bachmann
Generalized-ensemble simulations enable the study of complex adsorption scenarios of a coarse-grained model polymer near an attractive nanostring, representing an ultrathin nanowir…