171 citations · 931 across the 18 of their papers we have counts for
18 papers
Scalable Generation of Spatial Transcriptomics from Histology Images via Whole-Slide Flow Matching
Tinglin Huang, Tianyu Liu, Mehrtash Babadi +2
Spatial transcriptomics (ST) has emerged as a powerful technology for bridging histology imaging with gene expression profiling. However, its application has been limited by low th…
A Coding Theory Perspective on Multiplexed Molecular Profiling of Biological Tissues
Luca D'Alessio, Litian Liu, Ken Duffy +3
High-throughput and quantitative experimental technologies are experiencing rapid advances in the biological sciences. One important recent technique is multiplexed fluorescence in…
CellSegmenter: unsupervised representation learning and instance segmentation of modular images
Luca D'Alessio, Mehrtash Babadi
We introduce CellSegmenter, a structured deep generative model and an amortized inference framework for unsupervised representation learning and instance segmentation tasks. The pr…
Multiple-scale structures: from Faraday waves to soft-matter quasicrystals
Samuel Savitz, Mehrtash Babadi, Ron Lifshitz
For many years, quasicrystals were observed only as solid-state metallic alloys, yet current research is now actively exploring their formation in a variety of soft materials, incl…
The theory of parametrically amplified electron-phonon superconductivity
Mehrtash Babadi, Michael Knap, Ivar Martin +2
The ultrafast optical manipulation of ordered phases in strongly correlated materials is a topic of significant theoretical, experimental, and technological interest. Inspired by a…
Dynamical Cooper pairing in non-equilibrium electron-phonon systems
Michael Knap, Mehrtash Babadi, Gil Refael +2
We analyze Cooper pairing instabilities in strongly driven electron-phonon systems. The light-induced non-equilibrium state of phonons results in a simultaneous increase of the sup…