activity
20242026
most citedBMFM-RNA: whole-cell expression decoding improves transcriptomic foundation models

1 citations · 1 across the 2 of their papers we have counts for

collaborators

5 papers

cs.AI2026

Perspective on Bias in Biomedical AI: Preventing Downstream Healthcare Disparities

Michal Rosen-Zvi, Yoav Kan-Tor, Michael Danziger +6

Healthcare disparities persist across socioeconomic boundaries, often attributed to unequal access to screening, diagnostics, and therapeutics. However, this perspective highlights…

q-bio.GN20261 cited

BMFM-RNA: whole-cell expression decoding improves transcriptomic foundation models

Michael M. Danziger, Bharath Dandala, Viatcheslav Gurev +12

Transcriptomic foundation models pretrained with masked language modeling can achieve low pretraining loss yet produce poor cell representations for downstream tasks. We introduce…

q-bio.GN2025

BMFM-DNA: A SNP-aware DNA foundation model to capture variant effects

Hongyang Li, Sanjoy Dey, Bum Chul Kwon +7

Large language models (LLMs) trained on text demonstrated remarkable results on natural language processing (NLP) tasks. These models have been adapted to decipher the language of…

q-bio.QM2025

MAMMAL -- Molecular Aligned Multi-Modal Architecture and Language

Yoel Shoshan, Moshiko Raboh, Michal Ozery-Flato +18

Large language models applied to vast biological datasets have the potential to transform biology by uncovering disease mechanisms and accelerating drug development. However, curre…

cs.AI2024

Does your model understand genes? A benchmark of gene properties for biological and text models

Yoav Kan-Tor, Michael Morris Danziger, Eden Zohar +2

The application of deep learning methods, particularly foundation models, in biological research has surged in recent years. These models can be text-based or trained on underlying…