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cs.LG2026
Static Recovery Is Not Dynamic Stability: Dynamics-Aware Benchmarking of Protein Motif Scaffolding
Emile de Bruyn, Moritz Schäffler, Jannik Schneider +9
Protein motif scaffolding benchmarks assess whether generative models can build scaffolds around functionally important residues. Their conclusions depend on which motifs are teste…
cs.LG2026
MatBind: A Shared Embedding Space for Multimodal Materials Characterization
Le Yang, Anoop K. Chandran, Jona Östreicher +8
Fully characterizing a crystalline material requires integrating heterogeneous data sources -- atomic structures, diffraction patterns, electronic density of states, and natural la…
cs.LG2024
OneProt: Towards Multi-Modal Protein Foundation Models
Klemens Flöge, Srisruthi Udayakumar, Johanna Sommer +8
Recent advances in Artificial Intelligence have enabled multi-modal systems to model and translate diverse information spaces. Extending beyond text and vision, we introduce OnePro…