activity
20212024
most citedAutomated Identification of Cell Populations in Flow Cytometry Data with Transformers

30 citations · 31 across the 5 of their papers we have counts for

collaborators

5 papers

cs.CV2024★ 1 cited

On the importance of local and global feature learning for automated measurable residual disease detection in flow cytometry data

Lisa Weijler, Michael Reiter, Pedro Hermosilla +2

This paper evaluates various deep learning methods for measurable residual disease (MRD) detection in flow cytometry (FCM) data, addressing questions regarding the benefits of mode…

cs.LG2024

Automated Immunophenotyping Assessment for Diagnosing Childhood Acute Leukemia using Set-Transformers

Elpiniki Maria Lygizou, Michael Reiter, Margarita Maurer-Granofszky +2

Acute Leukemia is the most common hematologic malignancy in children and adolescents. A key methodology in the diagnostic evaluation of this malignancy is immunophenotyping based o…

eess.IV2023

FATE: Feature-Agnostic Transformer-based Encoder for learning generalized embedding spaces in flow cytometry data

Lisa Weijler, Florian Kowarsch, Michael Reiter +3

While model architectures and training strategies have become more generic and flexible with respect to different data modalities over the past years, a persistent limitation lies…

q-bio.QM2023

Explainable Techniques for Analyzing Flow Cytometry Cell Transformers

Florian Kowarsch, Lisa Weijler, FLorian Kleber +4

Explainability for Deep Learning Models is especially important for clinical applications, where decisions of automated systems have far-reaching consequences. While various post-h…

q-bio.QM2021★ 30 cited

Automated Identification of Cell Populations in Flow Cytometry Data with Transformers

Matthias Wödlinger, Michael Reiter, Lisa Weijler +8

Acute Lymphoblastic Leukemia (ALL) is the most frequent hematologic malignancy in children and adolescents. A strong prognostic factor in ALL is given by the Minimal Residual Disea…