215 citations · 337 across the 17 of their papers we have counts for
17 papers
Medical Slice Transformer: Improved Diagnosis and Explainability on 3D Medical Images with DINOv2
Gustav Müller-Franzes, Firas Khader, Robert Siepmann +4
MRI and CT are essential clinical cross-sectional imaging techniques for diagnosing complex conditions. However, large 3D datasets with annotations for deep learning are scarce. Wh…
On Instabilities of Unsupervised Denoising Diffusion Models in Magnetic Resonance Imaging Reconstruction
Tianyu Han, Sven Nebelung, Firas Khader +2
Denoising diffusion models offer a promising approach to accelerating magnetic resonance imaging (MRI) and producing diagnostic-level images in an unsupervised manner. However, our…
Compute-Efficient Medical Image Classification with Softmax-Free Transformers and Sequence Normalization
Firas Khader, Omar S. M. El Nahhas, Tianyu Han +4
The Transformer model has been pivotal in advancing fields such as natural language processing, speech recognition, and computer vision. However, a critical limitation of this mode…
Joint multi-task learning improves weakly-supervised biomarker prediction in computational pathology
Omar S. M. El Nahhas, Georg Wölflein, Marta Ligero +5
Deep Learning (DL) can predict biomarkers directly from digitized cancer histology in a weakly-supervised setting. Recently, the prediction of continuous biomarkers through regress…
Generating Synthetic Computed Tomography for Radiotherapy: SynthRAD2023 Challenge Report
Evi M. C. Huijben, Maarten L. Terpstra, Arthur Jr. Galapon +56
Radiation therapy plays a crucial role in cancer treatment, necessitating precise delivery of radiation to tumors while sparing healthy tissues over multiple days. Computed tomogra…
An Ordinal Regression Framework for a Deep Learning Based Severity Assessment for Chest Radiographs
Patrick Wienholt, Alexander Hermans, Firas Khader +5
This study investigates the application of ordinal regression methods for categorizing disease severity in chest radiographs. We propose a framework that divides the ordinal regres…
From Whole-slide Image to Biomarker Prediction: A Protocol for End-to-End Deep Learning in Computational Pathology
Omar S. M. El Nahhas, Marko van Treeck, Georg Wölflein +9
Hematoxylin- and eosin (H&E) stained whole-slide images (WSIs) are the foundation of diagnosis of cancer. In recent years, development of deep learning-based methods in computation…
Reconstruction of Patient-Specific Confounders in AI-based Radiologic Image Interpretation using Generative Pretraining
Tianyu Han, Laura Žigutytė, Luisa Huck +9
Detecting misleading patterns in automated diagnostic assistance systems, such as those powered by Artificial Intelligence, is critical to ensuring their reliability, particularly…
Medical Foundation Models are Susceptible to Targeted Misinformation Attacks
Tianyu Han, Sven Nebelung, Firas Khader +9
Large language models (LLMs) have broad medical knowledge and can reason about medical information across many domains, holding promising potential for diverse medical applications…
Transformers for CT Reconstruction From Monoplanar and Biplanar Radiographs
Firas Khader, Gustav Müller-Franzes, Tianyu Han +4
Computed Tomography (CT) scans provide detailed and accurate information of internal structures in the body. They are constructed by sending x-rays through the body from different…
Cascaded Cross-Attention Networks for Data-Efficient Whole-Slide Image Classification Using Transformers
Firas Khader, Jakob Nikolas Kather, Tianyu Han +4
Whole-Slide Imaging allows for the capturing and digitization of high-resolution images of histological specimen. An automated analysis of such images using deep learning models is…
Fibroglandular Tissue Segmentation in Breast MRI using Vision Transformers -- A multi-institutional evaluation
Gustav Müller-Franzes, Fritz Müller-Franzes, Luisa Huck +9
Accurate and automatic segmentation of fibroglandular tissue in breast MRI screening is essential for the quantification of breast density and background parenchymal enhancement. I…
AIROGS: Artificial Intelligence for RObust Glaucoma Screening Challenge
Coen de Vente, Koenraad A. Vermeer, Nicolas Jaccard +33
The early detection of glaucoma is essential in preventing visual impairment. Artificial intelligence (AI) can be used to analyze color fundus photographs (CFPs) in a cost-effectiv…
Medical Diagnosis with Large Scale Multimodal Transformers: Leveraging Diverse Data for More Accurate Diagnosis
Firas Khader, Gustav Mueller-Franzes, Tianci Wang +9
Multimodal deep learning has been used to predict clinical endpoints and diagnoses from clinical routine data. However, these models suffer from scaling issues: they have to learn…
Diffusion Probabilistic Models beat GANs on Medical Images
Gustav Müller-Franzes, Jan Moritz Niehues, Firas Khader +8
The success of Deep Learning applications critically depends on the quality and scale of the underlying training data. Generative adversarial networks (GANs) can generate arbitrary…
Collaborative Training of Medical Artificial Intelligence Models with non-uniform Labels
Soroosh Tayebi Arasteh, Peter Isfort, Marwin Saehn +6
Due to the rapid advancements in recent years, medical image analysis is largely dominated by deep learning (DL). However, building powerful and robust DL models requires training…
Medical Diffusion: Denoising Diffusion Probabilistic Models for 3D Medical Image Generation
Firas Khader, Gustav Mueller-Franzes, Soroosh Tayebi Arasteh +12
Recent advances in computer vision have shown promising results in image generation. Diffusion probabilistic models in particular have generated realistic images from textual input…