2 citations · 6 across the 5 of their papers we have counts for
5 papers
Assessing microbiome engraftment extent following fecal microbiota transplant with q2-fmt
Chloe Herman, Evan Bolyen, Anthony Simard +2
We present q2-fmt, a QIIME 2 plugin that provides diverse methods for assessing the extent of microbiome engraftment following fecal microbiota transplant. The methods implemented…
Upcycling Human Excrement: The Gut Microbiome to Soil Microbiome Axis
Jeff Meilander, Chloe Herman, Andrew Manley +34
Human excrement composting (HEC) is a sustainable strategy for human excrement (HE) management that recycles nutrients and mitigates health risks while reducing reliance on freshwa…
Facilitating bootstrapped and rarefaction-based microbiome diversity analysis with q2-boots
Isaiah Raspet, Elizabeth Gehret, Chloe Herman +5
Background: We present q2-boots, a QIIME 2 plugin that facilitates bootstrapped and rarefaction-based microbiome diversity analysis. This plugin provides eight new actions that all…
Assessing Engraftment Following Fecal Microbiota Transplant
Chloe Herman, Bridget M. Barker, Thais F. Bartelli +9
Fecal Microbiota Transplant (FMT) is an FDA approved treatment for recurrent Clostridium difficile infections, and is being explored for other clinical applications, from alleviati…
Facilitating Bioinformatics Reproducibility
Christopher R. Keefe, Matthew R. Dillon, Chloe Herman +4
Study reproducibility is essential to corroborate, build on, and learn from the results of scientific research but is notoriously challenging in bioinformatics, which often involve…