3 papers
q-bio.PE2025
The two-clock problem in population dynamics
Kaan Öcal, Michael P. H. Stumpf
Biological time can be measured in two ways: in generations and in physical (chronological) time. When generations overlap, these two notions diverge, which impedes our ability to…
q-bio.CB2024
Mapping, modeling, and reprogramming cell-fate decision making systems
Lucy Ham, Taylor E. Woodford, Megan A. Coomer +1
Many cellular processes involve information processing and decision making. We can probe these processes at increasing molecular detail. The analysis of heterogeneous data remains…
q-bio.QM2024
Cell size distributions in lineages
Kaan Öcal, Michael P. H. Stumpf
Cells actively regulate their size during the cell cycle to maintain volume homeostasis across generations. While various mathematical models of cell size regulation have been prop…