18 citations · 22 across the 5 of their papers we have counts for
5 papers
Fluctuating environments are sufficient to drive substantial variability in species abundance across locations
James F. D. Henderson, Andreas Tiffeau-Mayer
Species growing in environments that change in time and space will vary in their abundance across locations, even in the absence of persistent location preferences. Here we quantif…
Data-driven Discovery of Biophysical T Cell Receptor Co-specificity Rules
Andrew G. T. Pyo, Yuta Nagano, Martina Milighetti +5
The biophysical interactions between the T cell receptor (TCR) and its ligands determine the specificity of the cellular immune response. However, the immense diversity of receptor…
Contrastive learning of T cell receptor representations
Yuta Nagano, Andrew Pyo, Martina Milighetti +4
Computational prediction of the interaction of T cell receptors (TCRs) and their ligands is a grand challenge in immunology. Despite advances in high-throughput assays, specificity…
Limits on Inferring T-cell Specificity from Partial Information
James Henderson, Yuta Nagano, Martina Milighetti +1
A key challenge in molecular biology is to decipher the mapping of protein sequence to function. To perform this mapping requires the identification of sequence features most infor…
Unbiased estimation of sampling variance for Simpson's diversity index
Andreas Tiffeau-Mayer
Quantification of measurement uncertainty is crucial for robust scientific inference, yet accurate estimates of this uncertainty remain elusive for ecological measures of diversity…