3 papers
cs.AI2026
BRAINCELL-AID: An Agentic AI Created Brain Cell Type Resource for Community Annotation
Rongbin Li, Wenbo Chen, Zhao Li +13
Single-cell RNA sequencing has transformed our ability to identify diverse cell types and their transcriptomic signatures. However, annotating these signatures-especially those inv…
q-bio.QM2024
GPTON: Generative Pre-trained Transformers enhanced with Ontology Narration for accurate annotation of biological data
Rongbin Li, Wenbo Chen, Jinbo Li +4
By leveraging GPT-4 for ontology narration, we developed GPTON to infuse structured knowledge into LLMs through verbalized ontology terms, achieving accurate text and ontology anno…
cs.LG2024
Geneverse: A collection of Open-source Multimodal Large Language Models for Genomic and Proteomic Research
Tianyu Liu, Yijia Xiao, Xiao Luo +3
The applications of large language models (LLMs) are promising for biomedical and healthcare research. Despite the availability of open-source LLMs trained using a wide range of bi…