activity
20162025
most citedAn expanded evaluation of protein function prediction methods shows an improvement in accuracy

457 citations · 470 across the 8 of their papers we have counts for

collaborators

8 papers

cs.CL2025

CUPCase: Clinically Uncommon Patient Cases and Diagnoses Dataset

Oriel Perets, Ofir Ben Shoham, Nir Grinberg +1

Medical benchmark datasets significantly contribute to developing Large Language Models (LLMs) for medical knowledge extraction, diagnosis, summarization, and other uses. Yet, curr…

cs.CL2024

MedConceptsQA: Open Source Medical Concepts QA Benchmark

Ofir Ben Shoham, Nadav Rappoport

We present MedConceptsQA, a dedicated open source benchmark for medical concepts question answering. The benchmark comprises of questions of various medical concepts across differe…

cs.LG2024

DSF-GAN: DownStream Feedback Generative Adversarial Network

Oriel Perets, Nadav Rappoport

Utility and privacy are two crucial measurements of the quality of synthetic tabular data. While significant advancements have been made in privacy measures, generating synthetic s…

stat.AP2024

Surgery duration prediction using multi-task feature selection

David Azriel, Yosef Rinott, Orna Tal +2

Efficient optimization of operating room (OR) activity poses a significant challenge for hospital managers due to the complex and risky nature of the environment. The traditional "…

cs.CL2023★ 9 cited

CPLLM: Clinical Prediction with Large Language Models

Ofir Ben Shoham, Nadav Rappoport

We present Clinical Prediction with Large Language Models (CPLLM), a method that involves fine-tuning a pre-trained Large Language Model (LLM) for clinical disease and readmission…

cs.LG2023★ 2 cited

Federated Learning of Medical Concepts Embedding using BEHRT

Ofir Ben Shoham, Nadav Rappoport

Electronic Health Records (EHR) data contains medical records such as diagnoses, medications, procedures, and treatments of patients. This data is often considered sensitive medica…

cs.LG2023★ 2 cited

Subpopulation-Specific Synthetic EHR for Better Mortality Prediction

Oriel Perets, Nadav Rappoport

Electronic health records (EHR) often contain different rates of representation of certain subpopulations (SP). Factors like patient demographics, clinical condition prevalence, an…

q-bio.QM2016★ 457 cited

An expanded evaluation of protein function prediction methods shows an improvement in accuracy

Yuxiang Jiang, Tal Ronnen Oron, Wyatt T Clark +144

Background: The increasing volume and variety of genotypic and phenotypic data is a major defining characteristic of modern biomedical sciences. At the same time, the limitations i…