activity
20212025
most citedClinically Relevant Latent Space Embedding of Cancer Histopathology Slides through Variational Autoencoder Based Image Compression

6 citations · 15 across the 9 of their papers we have counts for

collaborators

9 papers

cs.CV2025

Dual Codebook VQ: Enhanced Image Reconstruction with Reduced Codebook Size

Parisa Boodaghi Malidarreh, Jillur Rahman Saurav, Thuong Le Hoai Pham +5

Vector Quantization (VQ) techniques face significant challenges in codebook utilization, limiting reconstruction fidelity in image modeling. We introduce a Dual Codebook mechanism…

eess.SP2024★ 1 cited

Real-Time Diagnostic Integrity Meets Efficiency: A Novel Platform-Agnostic Architecture for Physiological Signal Compression

Neel R Vora, Amir Hajighasemi, Cody T. Reynolds +16

Head-based signals such as EEG, EMG, EOG, and ECG collected by wearable systems will play a pivotal role in clinical diagnosis, monitoring, and treatment of important brain disorde…

q-bio.TO2024★ 1 cited

Predicting Future States with Spatial Point Processes in Single Molecule Resolution Spatial Transcriptomics

Biraaj Rout, Priyanshi Borad, Parisa Boodaghi Malidarreh +6

In this paper, we introduce a pipeline based on XGboost to predict the future distribution of cells that are expressed by the Sog-D gene (active cells) in both the Anterior to post…

q-bio.TO2023★ 4 cited

The State of Applying Artificial Intelligence to Tissue Imaging for Cancer Research and Early Detection

Michael Robben, Amir Hajighasemi, Mohammad Sadegh Nasr +9

Artificial intelligence represents a new frontier in human medicine that could save more lives and reduce the costs, thereby increasing accessibility. As a consequence, the rate of…

eess.IV2023★ 1 cited

Multimodal Pathology Image Search Between H&E Slides and Multiplexed Immunofluorescent Images

Amir Hajighasemi, MD Jillur Rahman Saurav, Mohammad S Nasr +6

We present an approach for multimodal pathology image search, using dynamic time warping (DTW) on Variational Autoencoder (VAE) latent space that is fed into a ranked choice voting…

eess.IV2023

Histopathology Slide Indexing and Search: Are We There Yet?

Helen H. Shang, Mohammad Sadegh Nasr, Jai Prakash Veerla +7

The search and retrieval of digital histopathology slides is an important task that has yet to be solved. In this case study, we investigate the clinical readiness of three state-o…