12 citations · 19 across the 4 of their papers we have counts for
4 papers
Open and Sustainable AI: challenges, opportunities and the road ahead in the life sciences (October 2025 -- Version 2)
Gavin Farrell, Eleni Adamidi, Rafael Andrade Buono +27
Artificial intelligence (AI) has recently seen transformative breakthroughs in the life sciences, expanding possibilities for researchers to interpret biological information at an…
Towards a Unified Framework for Determining Conformational Ensembles of Disordered Proteins
Hamidreza Ghafouri, Pavel Kadeřávek, Ana M Melo +23
Disordered proteins play essential roles in myriad cellular processes, yet their structural characterization remains a major challenge due to their dynamic and heterogeneous nature…
DOME Registry: Implementing community-wide recommendations for reporting supervised machine learning in biology
Omar Abdelghani Attafi, Damiano Clementel, Konstantinos Kyritsis +17
Supervised machine learning (ML) is used extensively in biology and deserves closer scrutiny. The DOME recommendations aim to enhance the validation and reproducibility of ML resea…
CAFA-evaluator: A Python Tool for Benchmarking Ontological Classification Methods
Damiano Piovesan, Davide Zago, Parnal Joshi +8
We present CAFA-evaluator, a powerful Python program designed to evaluate the performance of prediction methods on targets with hierarchical concept dependencies. It generalizes mu…