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cs.CL2025★ 1 cited
Clinical ModernBERT: An efficient and long context encoder for biomedical text
Simon A. Lee, Anthony Wu, Jeffrey N. Chiang
We introduce Clinical ModernBERT, a transformer based encoder pretrained on large scale biomedical literature, clinical notes, and medical ontologies, incorporating PubMed abstract…
cs.CL2024
Emergency Department Decision Support using Clinical Pseudo-notes
Simon A. Lee, Sujay Jain, Alex Chen +4
In this work, we introduce the Multiple Embedding Model for EHR (MEME), an approach that serializes multimodal EHR tabular data into text using pseudo-notes, mimicking clinical tex…