2 papers
q-bio.GN2026
Parameter-free representations outperform single-cell foundation models on downstream benchmarks
Huan Souza, Pankaj Mehta
Single-cell RNA sequencing (scRNA-seq) data exhibit strong and reproducible statistical structure. This has motivated the development of large-scale foundation models, such as Tran…
q-bio.GN2025
Inferring genotype-phenotype maps using attention models
Krishna Rijal, Caroline M. Holmes, Samantha Petti +3
Predicting phenotype from genotype is a central challenge in genetics. Traditional approaches in quantitative genetics typically analyze this problem using methods based on linear…